Tried manually updating the theme, and this time, it worked! However, it caused another problem (on the back end, nothing front end that I can see), which I’ll submit in a different thread.
Also tried editing the canonical.php file as suggested in the WordPress thread. Pagination still broken.
Just tried replacing the query.php file as instructed in the link. Pagination still doesn’t work. Note: I’ve also updated to 3.4.7. Any other suggestions?
I’m having exactly the same issue–updated to 3.4.7, pagination still not working.